../../tmp/servers/virsirnadb/356409268
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1281 | 2 | acgttcagtgtaatgcaa | 19 | |
| AY790926.1 | Human coxsackievirus A16 strain shzh00-1, complete genome | 1278 | .................. | 1295 | 94 |
| EU262658.1 | Human coxsackievirus A16 strain shzh05-1, complete genome | 1278 | .................. | 1295 | 94 |
| FJ198212.1 | Human coxsackievirus A16 strain GZ08, complete genome | 1278 | .................. | 1295 | 94 |
| AF177911.1 | Coxsackievirus A16 polyprotein gene, complete cds | 1278 | ................g. | 1295 | 89 |
| AY697460.1 | Human enterovirus 90 polyprotein gene, complete cds | 1282 | .t................ | 1299 | 89 |
| AB192877.1 | Human enterovirus 90 genomic RNA, complete genome | 1282 | ................t. | 1299 | 89 |
| X00596.1 | Poliovirus type 3 mRNA (vaccine strain Sabin 3 (Leon 12a1b)) | 1277 | ....g............_ | 1293 | 84 |
| X00925.1 | Poliovirus type 3 leon 12 a1b sequence (P3/Leon 12 a1b) | 1275 | ....g............_ | 1291 | 84 |
| K01392.1 | POL3L37 Poliovirus P3/Leon/37 (type 3), complete genome | 1275 | ....g............_ | 1291 | 84 |
| AY184221.1 | Human poliovirus 3 strain Sabin 3, complete genome | 1275 | ....g............_ | 1291 | 84 |
| AF541919.1 | Human poliovirus 3 isolate PV3/NOR/01/8 polyprotein mRNA, complete cd | 1265 | ....g............_ | 1281 | 84 |
| AF111953.2 | Human poliovirus 1 isolate CHN-Hebei/91-2, complete genome | 1279 | ....g............_ | 1295 | 84 |
| AF111961.2 | Human poliovirus 1 isolate CHN-Guangdong/92-2, complete genome | 1279 | ....g............_ | 1295 | 84 |
| AF111982.2 | Human poliovirus 1 isolate CHN-Yunnan/92, complete genome | 1279 | ....g............_ | 1295 | 84 |
| AF111983.3 | Human poliovirus 1 isolate CHN-Henan/91-3, complete genome | 1279 | ....g............_ | 1295 | 84 |
| AB205395.1 | Human enterovirus C genomic RNA, complete genome, strain: Cambodia-02 | 1275 | ....g............_ | 1291 | 84 |
| EF456707.1 | Human poliovirus 3 isolate K/2002 polyprotein gene, complete cds | 1235 | ....g............_ | 1251 | 84 |
| AY896765.1 | Human enterovirus B strain EV7-15936-01 from Azerbaijan polyprotein g | 1251 | .t..............._ | 1267 | 84 |
| DQ534205.1 | Human echovirus 30 isolate 14916net87, complete genome | 1277 | ....g............_ | 1293 | 84 |
| HM775882.1 | Human echovirus 5 isolate Kor06-ECV5-253cn, complete genome | 1271 | ....g............_ | 1287 | 84 |
| AY421766.1 | Human coxsackievirus A8 strain Donovan, complete genome | 1276 | ....c...........c. | 1293 | 84 |
| AY697459.1 | Human enterovirus 89 polyprotein gene, complete cds | 1280 | ....c...........c. | 1297 | 84 |
| DQ341357.1 | Human enterovirus 71 isolate 7F-AUS-6-99, complete genome | 1277 | ....g...........t. | 1294 | 84 |
| AF326764.2 | Simian enterovirus 46 strain OM22 (P15), complete genome | 1275 | ....g...........t. | 1292 | 84 |
| HQ269389.1 | Human coxsackievirus A16 isolate XM-CA16-3560, complete genome | 1279 | .............c..t. | 1296 | 84 |
| D00625.1 | POL2CG1 Human poliovirus 2 genomic RNA, complete genome | 1280 | ....a...........__ | 1295 | 78 |
| M12197.1 | POL2LAN Poliovirus type 2 (Lansing strain), complete genome | 1280 | ....a...........__ | 1295 | 78 |
| AY238473.1 | Human poliovirus 2 strain MEF-1 polyprotein gene, complete cds | 1280 | ....a...........__ | 1295 | 78 |
| AF448782.1 | Human poliovirus 2 strain EGY88-074, complete genome | 1280 | ....a...........__ | 1295 | 78 |
| AF448782.1 | Human poliovirus 2 strain EGY88-074, complete genome | 1709 | .t.g...........___ | 1695 | 68 |
| AF448783.1 | Human poliovirus 2 strain EGY93-034, complete genome | 1282 | ....a...........__ | 1297 | 78 |
| AF499635.1 | Human coxsackievirus A1 strain Tompkins, complete genome | 1244 | ....a...........__ | 1259 | 78 |
| DQ890388.1 | Human poliovirus 2 strain PER8310769, complete genome | 1280 | ....a...........__ | 1295 | 78 |
| DQ890388.1 | Human poliovirus 2 strain PER8310769, complete genome | 1709 | .t.g...........___ | 1695 | 68 |
| DQ890388.1 | Human poliovirus 2 strain PER8310769, complete genome | 987 | _____...a......... | 999 | 63 |
| AF328683.1 | Human coxsackievirus B4 polyprotein-like gene, complete sequence | 1275 | ....g...........__ | 1290 | 78 |
| AY843298.1 | Human enterovirus 80 strain USA/CA67-10387, complete genome | 1276 | ..........c.....__ | 1291 | 78 |
| AF499640.1 | Human coxsackievirus A18 strain G13, complete genome | 1277 | .t..a............_ | 1293 | 78 |
| AF499641.1 | Human coxsackievirus A19 strain 8663, complete genome | 1248 | .t..a............_ | 1264 | 78 |
| AF465513.1 | Human coxsackievirus A18 strain G-13, complete genome | 1277 | .t..a............_ | 1293 | 78 |
| AY036578.1 | Human echovirus 7 strain UMMC polyprotein gene, complete cds | 1274 | .t..c............_ | 1290 | 78 |
| AY302553.1 | Human echovirus 3 strain Morrisey complete genome | 1276 | .t..c............_ | 1292 | 78 |
| AY302555.1 | Human echovirus 32 strain PR-10 complete genome | 1265 | ..........c..c..._ | 1281 | 78 |
| AY843299.1 | Human enterovirus 81 strain USA/CA68-10389, complete genome | 1272 | .t...........c..._ | 1288 | 78 |
| AY843307.1 | Human enterovirus 97 strain BAN99-10355, complete genome | 1275 | .t..g............_ | 1291 | 78 |
| AY843307.1 | Human enterovirus 97 strain BAN99-10355, complete genome | 3475 | ____..........a.._ | 3487 | 63 |
| HM031191.1 | Human echovirus 25 strain HN-2, complete genome | 1276 | ....g..a........._ | 1292 | 78 |
| GQ279371.1 | Human coxsackievirus A16 strain SZ/HK08-7, complete genome | 1278 | ..........c..c..t. | 1295 | 78 |
| AF405666.1 | Human poliovirus 1 isolate HAI01007, complete genome | 1275 | .t..a...........__ | 1290 | 73 |
| AF405669.1 | Human poliovirus 1 isolate HAI00003, complete genome | 1276 | .t..a...........__ | 1291 | 73 |
| AF405682.1 | Human poliovirus 1 isolate DOR00041C1, complete genome | 1275 | .t..a...........__ | 1290 | 73 |
| AF405690.1 | Human poliovirus 1 isolate DOR00013, complete genome | 1275 | .t..a...........__ | 1290 | 73 |
| AF416342.1 | Human poliovirus 1 isolate HAI01-013, complete genome | 1275 | .t..a...........__ | 1290 | 73 |
| AF458333.1 | Human poliovirus 1 isolate HAI01015, complete genome | 1275 | .t..g...........__ | 1290 | 73 |
| AF538843.1 | Human poliovirus 1 isolate TCDC01-861, complete genome | 1267 | .t..a...........__ | 1282 | 73 |
| AY560657.1 | Human poliovirus 1 strain Brunhilde, complete genome | 1279 | .t..a...........__ | 1294 | 73 |
| AM040036.1 | Human poliovirus 2 complete virion genome, isolate PV2/5021-1/ISR99 | 1184 | .t..g...........__ | 1199 | 73 |
| AM040036.1 | Human poliovirus 2 complete virion genome, isolate PV2/5021-1/ISR99 | 1613 | .t.g...........___ | 1599 | 68 |
| AM040036.1 | Human poliovirus 2 complete virion genome, isolate PV2/5021-1/ISR99 | 891 | _____...g......... | 903 | 63 |
| AY302560.1 | Enterovirus 69 strain Toluca-1 complete genome | 1277 | .t..a...........__ | 1292 | 73 |
| AF499636.1 | Human coxsackievirus A11 strain Belgium-1, complete genome | 1279 | .t..g..a........._ | 1295 | 73 |
| X80059.1 | Echo Virus 11 genomic DNA | 1284 | .t..a..a........._ | 1300 | 73 |
| X00595.1 | Poliovirus type 2 genome (strain Sabin 2 (P712, Ch, 2ab)) | 1709 | .t.g...........___ | 1695 | 68 |
| AY184220.1 | Human poliovirus 2 strain Sabin 2, complete genome | 1709 | .t.g...........___ | 1695 | 68 |
| AY177685.1 | Human poliovirus 2, complete genome | 1709 | .t.g...........___ | 1695 | 68 |
| AY278549.1 | Human poliovirus 2 isolate P2S/Mog65-3 (20120), complete genome | 1709 | .t.g...........___ | 1695 | 68 |
| AY278550.1 | Human poliovirus 2 isolate P2S/Mog65-1 (20003), complete genome | 1709 | .t.g...........___ | 1695 | 68 |
| AY278551.1 | Human poliovirus 2 isolate P2S/Mog66-4 (21043), complete genome | 1709 | .t.g...........___ | 1695 | 68 |
| AY278552.1 | Human poliovirus 2 isolate P2S/Mog65-2 (20077), complete genome | 1709 | .t.g...........___ | 1695 | 68 |
| AY948201.1 | Human poliovirus 2 isolate CHN1025 polyprotein gene, complete cds | 1710 | .t.g...........___ | 1696 | 68 |
| DQ205099.1 | Human poliovirus 2 clone S2R9, complete genome | 1709 | .t.g...........___ | 1695 | 68 |
| AM084223.1 | Human poliovirus 2 RNA for polyprotein, complete genome, genomic RNA, | 1709 | .t.g...........___ | 1695 | 68 |
| AM084224.1 | Human poliovirus 2 RNA for polyprotein, complete genome, genomic RNA, | 1709 | .t.g...........___ | 1695 | 68 |
| AM084225.1 | Human poliovirus 2 RNA for polyprotein, complete genome, genomic RNA, | 1709 | .t.g...........___ | 1695 | 68 |
| DQ890385.1 | Human poliovirus 2 strain NIE0210766, complete genome | 1709 | .t.g...........___ | 1695 | 68 |
| DQ890386.1 | Human poliovirus 2 strain NIE0110767, complete genome | 1711 | .t.g...........___ | 1697 | 68 |
| DQ890387.1 | Human poliovirus 2 strain USA9810768, complete genome | 1709 | .t.g...........___ | 1695 | 68 |
| AM884184.1 | Human poliovirus 2, complete genome, genomic RNA, isolate VDPV MAD005 | 1709 | .t.g...........___ | 1695 | 68 |
| AM884185.1 | Human poliovirus 2, complete genome, genomic RNA, isolate VDPV MAD006 | 1709 | .t.g...........___ | 1695 | 68 |
| FJ898290.1 | Human poliovirus 2 strain Sabine 2 isolate CHN3024/HN/CHN/1999, compl | 1709 | .t.g...........___ | 1695 | 68 |
| HM107832.1 | Human poliovirus 2 isolate CHN1054, complete genome | 1709 | .t.g...........___ | 1695 | 68 |
| HM107834.1 | Human poliovirus 2 isolate CHN3219, complete genome | 1709 | .t.g...........___ | 1695 | 68 |
| HM107835.1 | Human poliovirus 2 isolate CHN8316, complete genome | 1709 | .t.g...........___ | 1695 | 68 |